Ran
|
Jobs
3
|
Files
37
|
Run time
14min
|
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README BADGES
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travis-ci
13 of 13 new or added lines in 2 files covered. (100.0%)
4044 of 6089 relevant lines covered (66.41%)
1.99 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
74.25 |
-19.14% | tools/mummer.py |
5 |
65.85 |
-3.28% | tools/__init__.py |
Lines | Coverage | ∆ | File |
---|---|---|---|
2 |
92.86 |
1.19% | tools/blast.py |
3 |
86.27 |
33.33% | tools/gatk.py |
4 |
89.19 |
1.31% | tools/mvicuna.py |
7 |
86.67 |
0.95% | tools/vphaser2.py |
8 |
63.64 |
0.89% | tools/muscle.py |
9 |
62.5 |
-9.2% | tools/bmtagger.py |
10 |
85.71 |
1.3% | tools/samtools.py |
11 |
83.58 |
1.23% | tools/diamond.py |
12 |
31.82 |
0.0% | tools/megan.py |
13 |
85.09 |
0.4% | tools/novoalign.py |
15 |
44.64 |
0.0% | tools/tbl2asn.py |
16 |
86.4 |
0.22% | tools/mafft.py |
20 |
74.04 |
0.63% | tools/kraken.py |
20 |
56.92 |
-5.98% | tools/last.py |
22 |
0.0 |
-18.18% | util/annot.py |
29 |
76.04 |
-0.15% | illumina.py |
30 |
50.0 |
3.85% | tools/trinity.py |
39 |
67.66 |
3.69% | tools/picard.py |
52 |
27.78 |
1.66% | tools/snpeff.py |
55 |
68.05 |
1.01% | read_utils.py |
56 |
72.0 |
0.09% | taxon_filter.py |
61 |
87.54 |
16.48% | assembly.py |
70 |
65.85 |
-3.28% | tools/__init__.py |
80 |
74.25 |
-19.14% | tools/mummer.py |
121 |
69.95 |
0.48% | intrahost.py |
ID | Job ID | Ran | Files | Coverage | |
---|---|---|---|---|---|
1 | 1512.1 | 37 |
66.33 |
Travis Job 1512.1 | |
2 | 1512.2 | 37 |
66.2 |
Travis Job 1512.2 | |
3 | 1512.3 | 37 |
66.04 |
Travis Job 1512.3 |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|