sequana / sequana / 1663324681
74%
master: 70%

LAST BUILD BRANCH: dev
DEFAULT BRANCH: master
Ran
Jobs 3
Files 130
Run time 3min
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1663324681

Pull #709

github

GitHub 
Merge 4d9d3972e into 9d7e48f37
Pull Request #709: Cleanup and several fixes

1858 of 1858 new or added lines in 57 files covered. (100.0%)

11300 of 17025 relevant lines covered (66.37%)

1.99 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
83.33
 0.0% sequana/criteria.py
1
93.33
 -2.12% sequana/gtf.py
1
91.67
 0.0% sequana/jsontool.py
1
96.55
 0.0% sequana/lazyimports.py
1
98.11
 0.0% sequana/modules_report/pacbio_input_bam.py
1
30.08
 0.14% sequana/scripts/main.py
1
85.78
 0.0% sequana/vcf_filter.py
2
67.6
 0.0% sequana/featurecounts.py
2
90.1
 0.0% sequana/freebayes_bcf_filter.py
2
83.87
 0.0% sequana/freebayes_vcf_filter.py
2
17.27
 0.0% sequana/modules_report/panther_enrichment.py
2
84.18
 0.0% sequana/taxonomy.py
3
91.09
 0.0% sequana/fastqc.py
4
18.26
 -0.49% sequana/modules_report/kraken.py
5
93.59
 -6.41% sequana/bed.py
5
74.56
 0.0% sequana/snpeff.py
6
93.71
 0.18% sequana/iem.py
6
55.45
 0.0% sequana/summary.py
7
48.31
 0.0% sequana/busco.py
7
57.65
 0.0% sequana/genbank.py
7
77.89
 0.0% sequana/mixture.py
10
31.79
 -0.14% sequana/rnadiff.py
11
56.92
 -0.44% sequana/find_motif.py
12
0.0
 0.0% sequana/canu_scanner.py
13
60.12
 0.0% sequana/contigs.py
15
78.6
 0.0% sequana/compare.py
16
91.03
 0.03% sequana/bedtools.py
17
55.28
 -0.07% sequana/demultiplex.py
21
85.66
 0.0% sequana/sequence.py
24
0.0
 0.0% sequana/salmon.py
29
17.97
 0.0% sequana/pacbio_amplicon.py
37
81.95
 -0.6% sequana/bamtools.py
43
75.8
 -3.53% sequana/pacbio.py
48
47.21
 0.03% sequana/isoseq.py
52
0.0
 sequana/macs3.py
177
0.0
 0.0% sequana/chipseq.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
60.12
 0.0% sequana/contigs.py
1
0.0
 0.0% sequana/cpg_islands.py
1
90.1
 0.0% sequana/freebayes_bcf_filter.py
1
83.87
 0.0% sequana/freebayes_vcf_filter.py
1
57.65
 0.0% sequana/genbank.py
1
93.71
 0.18% sequana/iem.py
1
77.89
 0.0% sequana/mixture.py
1
31.79
 -0.14% sequana/rnadiff.py
1
74.56
 0.0% sequana/snpeff.py
1
85.78
 0.0% sequana/vcf_filter.py
2
48.31
 0.0% sequana/busco.py
2
78.6
 0.0% sequana/compare.py
2
67.6
 0.0% sequana/featurecounts.py
2
17.97
 0.0% sequana/pacbio_amplicon.py
3
55.28
 -0.07% sequana/demultiplex.py
3
47.21
 0.03% sequana/isoseq.py
4
81.95
 -0.6% sequana/bamtools.py
4
85.66
 0.0% sequana/sequence.py
5
0.0
 0.0% sequana/salmon.py
6
0.0
 0.0% sequana/canu_scanner.py
7
91.03
 0.03% sequana/bedtools.py
10
75.8
 -3.53% sequana/pacbio.py
14
0.0
 0.0% sequana/chipseq.py
Jobs
ID Job ID Ran Files Coverage
1 1663324681.1 130
66.59
2 1663324681.2 130
66.36
3 1663324681.3 130
66.6
Source Files on build 1663324681