NeuralEnsemble / elephant / 1760
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Various Features Spike Train Generation (#416)

* bug fixed dealing with units

* fixed same unit error in trial shuffling

* added Bielefeld fim.so and adapted filtering and added window param to fpgrowth

* removed max_occ test

* further unit stuff

* debugging for new fim version

* enabled multithreading in fpgrowth

* less verbose in spade

* added correction factor to rate estimation

* only spiketrain with more than one spikes are corrected

* started rearranging the spike train generation: equilibrium rp. and class structure

* enable option equilibrium /ordinary

* annotations

* Fixed bugs for zero rate

* added test of boundary correction

* PEP8

* revert wrongly merged master

* separate from firing rate correction

* simplified recovered rate test

* finished restructuring in classes

* Added lognormal and inv-gaussian processes

* Updated Tests, added Log-Normal, Inverse Gaussian

* PEP8

* added test for invgauss and lognorm

* PEP8

* updated hardcoded SPADE tests

* update hardcoded UE test

* update hardcoded UE test

* update hard-coded spike train synchrony test

* PEP8

* combined Poisson and PPD into one function

* simplified compound poisson process, single interaction process

* deleted unused hidden functions

* added CV test

* added test for CV and first spike & added more comments

* PEP8

* simplified bib-tex entry

* started working in Robins review

* fix breaked test for Joint-ISI dithering

* continued working on Robins review

* fixed bug - in getting first spike function

* finished working on Robins review, improved first-spike function

* changed to return None for option in init

Co-authored-by: stellalessandra <a.stella@fz-juelich.de>
Co-authored-by: Alessandra Stella <stella@front.cluster>

6220 of 7014 relevant lines covered (88.68%)

0.89 hits per line

Jobs
ID Job ID Ran Files Coverage
1 1760.1 (DISTRIB="conda") 0
88.68
 Travis Job 1760.1
Source Files on build 1760
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