sequana / sequana / 1170832456
70%

DEFAULT BRANCH: master
Ran
Jobs 2
Files 172
Run time 23min
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11441 of 16959 relevant lines covered (67.46%)

1.35 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
97.87
 -2.13% sequana/datatools.py
1
93.53
 -0.59% sequana/iem.py
1
98.25
 0.0% sequana/modules_report/bamqc.py
1
98.11
 0.0% sequana/modules_report/pacbio_input_bam.py
1
0.0
 0.0% sequana/modules_report/quast.py
1
97.67
 0.0% sequana/viz/volcano.py
2
90.91
 -3.83% sequana/__init__.py
2
69.23
 -15.38% sequana/scripts/tools.py
3
0.0
 0.0% sequana/modules_report/joint_calling.py
3
87.93
 22.45% sequana/viz/clusterisation.py
4
80.49
 0.0% sequana/modules_report/variant_calling.py
4
78.13
 -10.76% sequana/viz/boxplot.py
10
57.65
 -0.49% sequana/genbank.py
12
0.0
 0.0% sequana/modules_report/bwa_bam_to_fastq.py
12
88.04
 0.0% sequana/vcf_filter.py
12
70.45
 -13.64% sequana/viz/dendogram.py
13
97.58
 0.52% sequana/fastq.py
13
93.75
 0.0% sequana/modules_report/cutadapt.py
15
0.0
 0.0% sequana/modules_report/trf.py
20
75.97
 0.0% sequana/modules_report/base_module.py
22
78.09
 0.0% sequana/freebayes_vcf_filter.py
24
89.24
 0.0% sequana/modules_report/coverage.py
25
25.35
 -0.36% sequana/modules_report/fastq_stats.py
25
84.18
 28.44% sequana/taxonomy.py
29
67.9
 0.2% sequana/featurecounts.py
30
66.67
 0.2% sequana/modules_report/summary.py
30
59.34
 -24.33% sequana/scripts/taxonomy.py
32
70.9
 0.73% sequana/modules_report/multi_summary.py
37
0.0
 0.0% sequana/modules_report/phix.py
67
70.23
 -6.69% sequana/gff3.py
76
20.83
 -71.0% sequana/modules_report/kraken.py
112
0.0
 0.0% sequana/modules_report/enrichment.py
130
0.0
 0.0% sequana/modules_report/rnadiff.py
132
82.55
 -5.47% sequana/bamtools.py
137
0.0
 0.0% sequana/chipseq.py
210
37.44
 0.71% sequana/scripts/main.py
334
33.33
 -41.61% sequana/rnadiff.py
Jobs
ID Job ID Ran Files Coverage
1 1170832456.1 172
67.68
2 1170832456.2 172
67.47
Source Files on build 1170832456