broadinstitute / hellbender / 2462
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DEFAULT BRANCH: master
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Jobs 2
Files 512
Run time 7min
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tomwhite 
Merge pull request #889 from broadinstitute/tw_spark_markdupes

Mark Duplicates for Spark

92 of 92 new or added lines in 6 files covered. (100.0%)

21549 of 26924 relevant lines covered (80.04%)

0.95 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
100.0
 src/main/java/org/broadinstitute/hellbender/tools/dataflow/transforms/markduplicates/MarkDuplicatesUtils.java
1
100.0
 src/main/java/org/broadinstitute/hellbender/tools/dataflow/transforms/markduplicates/ReadsKey.java
2
100.0
 src/main/java/org/broadinstitute/hellbender/tools/spark/transforms/markduplicates/MarkDuplicatesSpark.java
13
100.0
 src/main/java/org/broadinstitute/hellbender/tools/spark/transforms/markduplicates/MarkDuplicatesSparkUtils.java

Uncovered Existing Lines

Lines Coverage ∆ File
3
100.0
 src/main/java/org/broadinstitute/hellbender/engine/dataflow/DataflowCommandLineProgram.java
5
100.0
 src/main/java/org/broadinstitute/hellbender/CommandLineProgramTest.java
15
100.0
 src/main/java/org/broadinstitute/hellbender/utils/dataflow/DataflowUtils.java
27
100.0
 src/main/java/org/broadinstitute/hellbender/utils/dataflow/SmallBamWriter.java
Jobs
ID Job ID Ran Files Coverage
1 2462.1 (CLOUD=mandatory) 0
16.94
 Travis Job 2462.1
3 2462.3 (CLOUD=false) 0
78.22
 Travis Job 2462.3
Source Files on build 2462
Detailed source file information is not available for this build.