googlegenomics / dataflow-java / 339
23%
master: 21%

LAST BUILD BRANCH: bq-import
DEFAULT BRANCH: master
Ran
Jobs 3
Files 140
Run time 20min
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339

Pull #142

travis-ci

jakeakopp 
Break out ShardedBAMWriting.java into multiple files.
Pull Request #142: Sharded bam writer

553 of 2363 relevant lines covered (23.4%)

25.54 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 com/google/cloud/genomics/dataflow/utils/CallFilters.java
2
100.0
 com/google/cloud/genomics/dataflow/functions/ExtractSimilarCallsets.java
2
100.0
 com/google/cloud/genomics/dataflow/functions/OutputPCoAFile.java
2
100.0
 com/google/cloud/genomics/dataflow/functions/OutputPCoAFile.java$2
2
100.0
 com/google/cloud/genomics/dataflow/pipelines/AnnotateVariants.java$1
2
100.0
 com/google/cloud/genomics/dataflow/pipelines/ShardedBAMWriting.java$2
2
100.0
 com/google/cloud/genomics/dataflow/pipelines/ShardedBAMWriting.java$3
3
100.0
 com/google/cloud/genomics/dataflow/pipelines/CountReads.java$1
3
100.0
 com/google/cloud/genomics/dataflow/pipelines/TransmissionProbability.java$1
3
100.0
 com/google/cloud/genomics/dataflow/readers/ReadStreamer.java
4
100.0
 com/google/cloud/genomics/dataflow/pipelines/CalculateCoverage.java$ConvergeList
4
100.0
 com/google/cloud/genomics/dataflow/pipelines/ShardedBAMWriting.java$HeaderInfo
4
100.0
 com/google/cloud/genomics/dataflow/readers/VariantStreamer.java
5
100.0
 com/google/cloud/genomics/dataflow/pipelines/CalculateCoverage.java$CoverageCounts
5
100.0
 com/google/cloud/genomics/dataflow/pipelines/ShardedBAMWriting.java$1
6
100.0
 com/google/cloud/genomics/dataflow/pipelines/CalculateCoverage.java$CreateAnnotations
8
100.0
 com/google/cloud/genomics/dataflow/pipelines/IdentityByState.java
8
100.0
 com/google/cloud/genomics/dataflow/pipelines/TransmissionProbability.java
8
100.0
 com/google/cloud/genomics/dataflow/readers/ReadStreamer.java$ConvergeReadsList
8
100.0
 com/google/cloud/genomics/dataflow/readers/VariantStreamer.java$ConvergeVariantsList
9
100.0
 com/google/cloud/genomics/dataflow/readers/ReadReader.java
9
100.0
 com/google/cloud/genomics/dataflow/utils/GenomicsDatasetOptions.java$Methods
13
100.0
 com/google/cloud/genomics/dataflow/readers/VariantReader.java
15
100.0
 com/google/cloud/genomics/dataflow/functions/PCoAnalysis.java$GraphResult
17
100.0
 com/google/cloud/genomics/dataflow/readers/ReadStreamer.java$RetrieveReads
21
100.0
 com/google/cloud/genomics/dataflow/readers/VariantStreamer.java$RetrieveVariants
27
100.0
 com/google/cloud/genomics/dataflow/pipelines/CalculateCoverage.java
28
100.0
 com/google/cloud/genomics/dataflow/functions/PCoAnalysis.java
32
100.0
 com/google/cloud/genomics/dataflow/pipelines/VariantSimilarity.java
37
100.0
 com/google/cloud/genomics/dataflow/pipelines/CountReads.java
44
100.0
 com/google/cloud/genomics/dataflow/pipelines/ShardedBAMWriting.java
45
100.0
 com/google/cloud/genomics/dataflow/pipelines/AnnotateVariants.java
Jobs
ID Job ID Ran Files Coverage
1 339.1 0
23.41
 Travis Job 339.1
2 339.2 0
23.54
 Travis Job 339.2
3 339.3 0
23.54
 Travis Job 339.3
Source Files on build 339
Detailed source file information is not available for this build.