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angelolab / ark-analysis / 1464
94%

Build:
DEFAULT BRANCH: master
Ran 05 Sep 2020 12:23AM UTC
Jobs 1
Files 16
Run time 2s
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Context-dependent spatial analysis preparation (#212)

* Add file for context dependent spatial analysis

* Move functionality to spatial_analysis

* Split up compute_pos_cell_labels and add starting functionality for context-dependent spatial analysis

* Forgot to remove old function

* Add clarifying comment for mark1labels_per_id

* This is why you also run the spatial_analysis_utils_test before pushing

* Remove None types for get_pos_cell_labels functions and add documentation to them

* Remove old get_pos_cell_labels function

* Line length oopsies

* Need to rebuild documentation

* Add new documentation which doesn't add submodule and ignores test files

* Reset documentation

* Remove quotations from sphinx-apidoc

* Handle more refactoring of spatial analysis and make Makefile ignore parameter simpler

* Add some get_pos_cell_labels tests and a cluster test for compute_close_cell_num

* Add test utils back to ark.utils.md

* Blank lines error fix'

* Add headers for modules back in

987 of 1097 relevant lines covered (89.97%)

0.9 hits per line

Jobs
ID Job ID Ran Files Coverage
1 1464.1 (MPLBACKEND=Agg) 05 Sep 2020 12:23AM UTC 0
89.97
Travis Job 1464.1
Source Files on build 1464
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