biocore / biom-format / 1177
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Files 17
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PERF: Optimize remove_empty (#847)

* PERF: Optimize remove_empty

This uses vectorized operations to figure out which rows/columns to
remove. Takes processing a 12,000 x 200,000 table from 20 seconds to 1.1
seconds.

* DOC: Add changelog note

Thanks @wasade

1159 of 1457 branches covered (79.55%)

1 of 1 new or added line in 1 file covered. (100.0%)

2583 of 2998 relevant lines covered (86.16%)

2.58 hits per line

Jobs
ID Job ID Ran Files Coverage
1 1177.1 (PYTHON_VERSION=3.6 WITH_DOCTEST=True) 17
86.16
 Travis Job 1177.1
2 1177.2 (PYTHON_VERSION=3.7 WITH_DOCTEST=True) 17
86.16
 Travis Job 1177.2
3 1177.3 (PYTHON_VERSION=3.8 WITH_DOCTEST=True) 17
86.24
 Travis Job 1177.3
Source Files on build 1177