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DataBiosphere / leonardo / 12170
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DEFAULT BRANCH: develop
Ran 03 Sep 2020 03:28PM UTC
Jobs 1
Files 96
Run time 1min
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[IA-2088] [IA-2141] [IA-2089] [IA-2170] [IA-2140] Back Leo helm installs Galaxy (#1587)

* refactor

* shell

* galaxy app config updates

* various

* compiling

* existing units tests passing

* refactor

* fix some of the galaxy chart override mistakes

* fix ingress path

* galaxykubeman chart override value parsing seems to work now

* Fix ingress.path - use appName instead of release

* Minor fixes, going to test in a fiab

* Add basic galaxy monitoring

* Release name must be unique per app within a cluster

* TEMP update go lib

* - add config maps to Galaxy install
- improve logging in GKEInterpreter
- add trailing slash to HttpGalaxyDAO to avoid 302 when status checking

* Added helm delete galaxy, and improved helm monitoring a bit

* Removed by mistake

* Fix unit test failures

* Create KSA and pass it to the helm command since it appears to be required now

Annotating for workload identity not implemented yet

* - add customEnvironmentVariables to Swagger and GetAppResponse
- added keepHistory as a configurable param to helm uninstall

* PR feedback so far; still need to add unit tests

* factor out buildReleaseName method

* Fix DB call

* helmScalaSdkV = 0.0.1-RC2

* More PR feedback and add a few tests

Co-authored-by: Rob Title <rtitle@broadinstitute.org>

5663 of 7264 relevant lines covered (77.96%)

0.78 hits per line

Jobs
ID Job ID Ran Files Coverage
1 12170.1 03 Sep 2020 03:28PM UTC 0
77.96
Travis Job 12170.1
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