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Merge pull request #109 from 4dn-dcic/kmp_env_and_command_utils_and_C4-278_C4-279_fixes

Additions to env_utils and command_utils, and fixes for C4-278 and C4-279

2019 of 2708 relevant lines covered (74.56%)

0.75 hits per line

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ID Job ID Ran Files Coverage
1 1323.1 0
74.56
 Travis Job 1323.1
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