markovmodel / PyEMMA / 1073
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DEFAULT BRANCH: devel
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Jobs 1
Files 124
Run time 4s
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franknoe 
Merge pull request #477 from markovmodel/FN_merge_1.3_into_devel

Merge 1.3 release branch into devel

3418 of 3418 new or added lines in 75 files covered. (100.0%)

8711 of 10239 relevant lines covered (85.08%)

0.85 hits per line

Uncovered Changes

Lines Coverage ∆ File
143
100.0
 pyemma/_ext/six.py
57
100.0
 pyemma/_ext/sklearn/base.py
50
100.0
 pyemma/plots/markovtests.py
40
100.0
 pyemma/_base/estimator.py
40
100.0
 pyemma/util/linalg.py
37
100.0
 pyemma/msm/estimators/lagged_model_validators.py
37
100.0
 pyemma/util/statistics.py
30
100.0
 pyemma/util/types.py
25
100.0
 pyemma/_base/model.py
23
100.0
 pyemma/msm/estimators/estimated_msm.py
22
100.0
 pyemma/msm/estimators/implied_timescales.py
20
100.0
 pyemma/msm/estimators/_dtraj_stats.py
17
100.0
 pyemma/msm/estimators/estimated_hmsm.py
17
100.0
 pyemma/util/units.py
14
100.0
 pyemma/msm/estimators/maximum_likelihood_msm.py
14
100.0
 pyemma/msm/models/hmsm.py
14
100.0
 pyemma/msm/models/msm.py
12
100.0
 pyemma/plots/plots2d.py
9
100.0
 pyemma/datasets/double_well_discrete.py
8
100.0
 pyemma/coordinates/transform/tica.py
8
100.0
 pyemma/msm/models/hmsm_sampled.py
7
100.0
 pyemma/coordinates/util/patches.py
7
100.0
 pyemma/msm/estimators/maximum_likelihood_hmsm.py
7
100.0
 pyemma/msm/models/msm_sampled.py
7
100.0
 pyemma/plots/timescales.py
5
100.0
 pyemma/msm/estimators/bayesian_hmsm.py
4
100.0
 pyemma/msm/api.py
3
100.0
 pyemma/coordinates/data/feature_reader.py
3
100.0
 pyemma/coordinates/transform/pca.py
2
100.0
 pyemma/coordinates/data/data_in_memory.py
2
100.0
 pyemma/coordinates/data/numpy_filereader.py
2
100.0
 pyemma/util/reflection.py
1
100.0
 pyemma/_ext/sklearn/parameter_search.py
1
100.0
 pyemma/coordinates/data/util/reader_utils.py
1
100.0
 pyemma/coordinates/tests/test_cluster_samples.py
1
100.0
 pyemma/coordinates/tests/test_pipeline.py
1
100.0
 pyemma/msm/tests/test_bayesian_hmsm.py
1
100.0
 pyemma/msm/tests/test_bayesian_msm.py
1
100.0
 pyemma/msm/tests/test_hmsm.py

Coverage Regressions

Lines Coverage ∆ File
7
100.0
 pyemma/util/types.py
7
100.0
 pyemma/util/annotators.py
3
100.0
 pyemma/coordinates/api.py
1
100.0
 pyemma/coordinates/tests/test_save_trajs.py
1
100.0
 pyemma/coordinates/data/featurizer.py
Jobs
ID Job ID Ran Files Coverage
1 1073.1 (pypi_pass=[secure]) 0
85.08
 Travis Job 1073.1
Source Files on build 1073
Detailed source file information is not available for this build.