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Restructure API, add two subpackages pattern and filters (#169)

* Update API, changelog, doc

Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>

* Correct module to subpackage in changelog

Signed-off-by: Håkon Wiik Ånes <hwaanes@gmail.com>

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Jobs
ID Job ID Ran Files Coverage
1 284.1 (DEPS="dask[array] hyperspy[learning] h5py matplotlib numpy numba scikit-image scipy" TEST_DEPS="pytest pytest-cov coveralls coverage" DEPLOY=false ENV=conda PYTHON_VERSION=3.8) 0
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 Travis Job 284.1
2 284.2 (DEPS="dask[array] hyperspy[learning] h5py matplotlib numpy numba scikit-image scipy" TEST_DEPS="pytest pytest-cov coveralls coverage" DEPLOY=false ENV=pip DEPLOY=true) 0
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 Travis Job 284.2
3 284.3 (DEPS="dask[array] hyperspy[learning] h5py matplotlib numpy numba scikit-image scipy" TEST_DEPS="pytest pytest-cov coveralls coverage" DEPLOY=false ENV=conda PYTHON_VERSION=3.8) 0
100.0
 Travis Job 284.3
5 284.5 (DEPS="dask[array] hyperspy[learning] h5py matplotlib numpy numba scikit-image scipy" TEST_DEPS="pytest pytest-cov coveralls coverage" DEPLOY=false ENV=conda PYTHON_VERSION=3.8 PATH="/c/tools/miniconda3/:/c/tools/miniconda3/Scripts:$PATH") 0
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 Travis Job 284.5
6 284.6 (DEPS="dask[array] hyperspy[learning] h5py matplotlib numpy numba scikit-image scipy" TEST_DEPS="pytest pytest-cov coveralls coverage" DEPLOY=false ENV=pip PYTHON_VERSION=3.7.5 PATH="/c/Python37:/c/Python37/Scripts:$PATH") 0
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 Travis Job 284.6
Source Files on build 284
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