broadinstitute / oncotator / 430
66%
develop: 66%

LAST BUILD BRANCH: v1.9.0.0
DEFAULT BRANCH: develop
Ran
Jobs 1
Files 188
Run time 14s
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LeeTL1220 
New version release branch.

1 of 1 new or added line in 1 file covered. (100.0%)

14258 of 19906 relevant lines covered (71.63%)

0.72 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 test/CacheManagerTest.py
1
100.0
 test/DatasourceInstallUtilsTest.py
1
100.0
 test/MutationDataTest.py
1
100.0
 test/MutUtilsTest.py
1
100.0
 test/ReferenceDatasourceTest.py
1
100.0
 test/SimpleBedOutputRendererTest.py
1
100.0
 test/VariantClassifierTest.py
2
100.0
 oncotator/datasources/GenericGeneDatasource.py
2
100.0
 oncotator/input/MafliteInputMutationCreator.py
2
100.0
 test/BigWigTest.py
3
100.0
 oncotator/input/InputMutationCreator.py
4
100.0
 oncotator/input/OnpQueue.py
4
100.0
 test/GenericTranscriptDatasourceTest.py
4
100.0
 test/OnpCombinerTest.py
5
100.0
 test/CosmicDatasourceTest.py
5
100.0
 test/TranscriptToUniProtProteinPositionTransformingDatasourceTest.py
6
100.0
 test/GenericGenomicMutationDatasourceTest.py
7
100.0
 oncotator/datasources/TabixIndexedTsvDatasource.py
7
100.0
 test/DatasourceFactoryTest.py
7
100.0
 test/GenericGeneDataSourceTest.py
8
100.0
 oncotator/input/VcfInputMutationCreator.py
9
100.0
 oncotator/utils/OncotatorCLIUtils.py
9
100.0
 test/GenericGeneProteinPositionDatasourceTest.py
14
100.0
 oncotator/MutationData.py
14
100.0
 oncotator/output/GeneListOutputRenderer.py
17
100.0
 oncotator/output/TcgaMafOutputRenderer.py
18
100.0
 test/TcgaVcfOutputRendererTest.py
22
100.0
 oncotator/utils/RunSpecificationFactory.py
23
100.0
 oncotator/output/TcgaVcfOutputRenderer.py
26
100.0
 oncotator/utils/RunSpecification.py
39
100.0
 oncotator/utils/MutUtils.py
40
100.0
 test/AnnotatorTest.py
40
100.0
 test/EnsemblTranscriptDatasourceTest.py
48
100.0
 oncotator/Annotator.py
48
100.0
 oncotator/Oncotator.py
64
100.0
 test/GafDatasourceTest.py
75
100.0
 test/TcgaMafOutputRendererTest.py
86
100.0
 test/HgvsChangeTransformerTest.py
Jobs
ID Job ID Ran Files Coverage
1 430.1 0
71.63
 Travis Job 430.1
Source Files on build 430