broadinstitute / oncotator / 409
66%

DEFAULT BRANCH: develop
Ran
Jobs 1
Files 186
Run time 32s
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
409

push

travis-ci

lbergelson 
Merge pull request #327 from broadinstitute/issue-325-OxoG_changes

Issue 325 First set of OxoG changes (allowing annotation overwriting and intelligent overwriting in TCGA MAF outputs)

527 of 527 new or added lines in 46 files covered. (100.0%)

14060 of 19678 relevant lines covered (71.45%)

0.71 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
100.0
 oncotator/output/GeneListOutputRenderer.py
1
100.0
 test/AnnotatorTest.py
1
100.0
 test/FieldMapCreatorTest.py
1
100.0
 test/GenericGeneProteinPositionDatasourceTest.py
1
100.0
 test/GenericGenomicMutationDatasourceTest.py
1
100.0
 test/OnpCombinerTest.py
2
100.0
 oncotator/Annotator.py
2
100.0
 test/CosmicDatasourceTest.py
3
100.0
 oncotator/utils/FieldMapCreator.py
3
100.0
 oncotator/utils/RunSpecification.py
7
100.0
 oncotator/utils/RunSpecificationFactory.py
11
100.0
 test/EnsemblTranscriptDatasourceTest.py
15
100.0
 test/GafDatasourceTest.py
16
100.0
 oncotator/Oncotator.py
25
100.0
 test/TcgaMafOutputRendererTest.py
39
100.0
 test/HgvsChangeTransformerTest.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 oncotator/datasources/TabixIndexedTsvDatasource.py
1
100.0
 oncotator/utils/RunSpecification.py
3
100.0
 oncotator/Oncotator.py
Jobs
ID Job ID Ran Files Coverage
1 409.1 0
71.45
 Travis Job 409.1
Source Files on build 409
Detailed source file information is not available for this build.