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angelolab / segmentation / 179
81%

Build:
DEFAULT BRANCH: master
Ran 28 Apr 2020 04:18AM UTC
Jobs 1
Files 7
Run time 1s
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Add compatibility with MIBItiff input files. (#75)

* Added mibitracker-client to docker requirements.

* Add MIBItiff sample file.

* Added function to load images from MIBItiff files.

* Added notebook for preprocessing MIBItiff data.

* Fix preprocessing notebook after adding MIBItiff sample data.

* Fix path of mibitiff sample file in test.

* Fix postprocessing notebook after adding MIBItiff sample data.

* Added jupyter_contrib_nbextensions to requirements, since it's used by the NB tests.

* Added real path to notebooks to simplify the testing.

* Added MIBItiff notebook to the list for testing.

* Fix loading all channels of MIBItiff file.

376 of 599 relevant lines covered (62.77%)

0.63 hits per line

Jobs
ID Job ID Ran Files Coverage
1 179.1 (MPLBACKEND=Agg) 28 Apr 2020 04:18AM UTC 0
62.77
Travis Job 179.1
Source Files on build 179
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