ilastik / lazyflow / 631

67%

master: 67%

Pull #331

travis-ci

Fixes NameError exception while guessing file type

Reproducible by opening n5 directory without n5 extension and if quilted
is not installed

ERROR 2019-12-23 14:52:19,687 log_exception 19326 139964751132480 Traceback (most recent call last):
  File "ilastik-project/ilastik/ilastik/applets/dataSelection/dataSelectionGui.py", line 408, in addFileNames
    new_infos = self._createDatasetInfos(roleIndex, paths)
  File "ilastik-project/ilastik/ilastik/applets/dataSelection/dataSelectionGui.py", line 529, in _createDatasetInfos
    info = self._createDatasetInfo(roleIndex, filePath, roi)
  File "ilastik-project/ilastik/ilastik/applets/dataSelection/dataSelectionGui.py", line 578, in _createDatasetInfo
    subvolume_roi=roi,
  File "ilastik-project/ilastik/ilastik/applets/dataSelection/opDataSelection.py", line 538, in create_or_fallback_to_absolute
    return cls(*args, **kwargs)
  File "ilastik-project/ilastik/ilastik/applets/dataSelection/opDataSelection.py", line 531, in __init__
    super().__init__(**fs_info_kwargs)
  File "ilastik-project/ilastik/ilastik/applets/dataSelection/opDataSelection.py", line 439, in __init__
    graph=Graph(), WorkingDirectory=self.base_dir, FilePath=self.filePath, SequenceAxis=self.sequence_axis
  File "ilastik-project/lazyflow/lazyflow/operator.py", line 141, in __call__
    instance._after_init()
  File "ilastik-project/lazyflow/lazyflow/operator.py", line 304, in _after_init
    self._setupOutputs()
  File "ilastik-project/lazyflow/lazyflow/operator.py", line 498, in _setupOutputs
    self.setupOutputs()
  File "ilastik-project/lazyflow/lazyflow/operators/ioOperators/opInputDataReader.py", line 217, in setupOutputs
    raise RuntimeError("Can't read " + filePath + " because it has an unrecognized format.")
RuntimeError: Can't read ilastik-project/swift/new_ds/attributes.json because it has an unrecognized format.

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