landlab / landlab / 6355

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travis-ci

Improvements on GDP (#1047)

* Handle zero permeable thickness

* no permeable thickness in adaptive timestep solver

* Bug fix: sign in velocity calculation

* Add water table symmetry test

* delint

* Small changes to syntax, add K setter

* Delint

* Docstrings update

* setter and property updates

* Start joss paper for gdp

* Add number_of_substeps property

* Add check for water table above surface

* fix porosity setter

* fix typo

* fix typo

* Delint, add test for water table above ground surface

* raw docstring

* add extra line before math equation

* Update gdp documentation

* Format shear stress docs in gdp

* Change reference frame

Substantial changes to bring model in line with governing equations, which are written in a coordinate system normal to the aquifer impermeable base. More work may be needed to optimize this code with the changes made.

* delint

* Begin joss paper

* Begin joss paper

* Fix reference frame attempt 2

* Update docs and items grid stores.

* Affiliations and component names

* Fix citation

* GDP documentation

* Update wt schematic

* doc reference

* Add dupuit theory doc

* revert docs to generate docstring

* Ref to complete theory in docstrings

* Figure and docstring references

* link to dupuit theory

* rename theory and fix shear stress docstring

* typo [skip ci]

* Change reference method

* Small formatting

* footnotes [skip ci]

* change references [skip ci]

* Correct reference frame once again

* delint

* Correct reference frame (final?)

* missing grid reference

* Calculate average qs over variable timesteps

* delint

* missing grid instance reference

* Update gdp documentation

* Fix gdp docs

* fixes for gdp docs

* gdp docs

* Figs in gdp documentation

* gdp docs fig [skip ci]

* gdp docs [skip ci]

* typo

* temporary rename lithology papers [skip ci]

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