Ran
|
Jobs
2
|
Files
43
|
Run time
6min
|
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README BADGES
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travis-ci-com
307 of 2705 branches covered (11.35%)
1482 of 6277 relevant lines covered (23.61%)
0.92 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
92.45 |
46.3% | tools/trinity.py |
3 |
60.53 |
-2.63% | util/stats.py |
4 |
94.37 |
12.73% | util/version.py |
6 |
85.37 |
-2.51% | tools/mvicuna.py |
6 |
89.09 |
-10.91% | tools/prinseq.py |
7 |
89.06 |
-2.6% | tools/blast.py |
7 |
85.71 |
22.81% | tools/last.py |
7 |
92.05 |
14.0% | tools/mafft.py |
7 |
81.08 |
-0.31% | tools/muscle.py |
7 |
86.67 |
0.95% | tools/vphaser2.py |
8 |
82.22 |
-0.13% | tools/diamond.py |
9 |
83.1 |
11.4% | tools/bmtagger.py |
9 |
84.13 |
31.19% | tools/gatk.py |
12 |
31.82 |
0.0% | tools/megan.py |
22 |
87.13 |
2.72% | tools/samtools.py |
22 |
0.0 |
-18.18% | util/annot.py |
23 |
81.06 |
-3.62% | tools/novoalign.py |
23 |
80.25 |
25.34% | util/cmd.py |
33 |
43.78 |
-0.43% | util/vcf.py |
35 |
28.17 |
-16.47% | tools/tbl2asn.py |
38 |
28.71 |
16.76% | util/genbank.py |
41 |
73.12 |
1.28% | interhost.py |
46 |
58.17 |
32.05% | tools/snpeff.py |
52 |
69.05 |
-27.25% | tools/bwa.py |
70 |
61.57 |
-11.83% | tools/kraken.py |
74 |
79.49 |
7.58% | taxon_filter.py |
83 |
88.53 |
38.78% | assembly.py |
89 |
82.39 |
12.91% | intrahost.py |
90 |
61.86 |
25.73% | ncbi.py |
91 |
83.31 |
15.72% | read_utils.py |
96 |
67.71 |
3.74% | tools/picard.py |
104 |
68.51 |
5.18% | util/misc.py |
145 |
61.99 |
-8.38% | tools/__init__.py |
159 |
66.41 |
-9.78% | illumina.py |
160 |
72.4 |
22.63% | util/file.py |
ID | Job ID | Ran | Files | Coverage | |
---|---|---|---|---|---|
5 | 984.5 (TRAVIS_JOB=test_py36) | 52 |
72.79 |
Travis Job 984.5 | |
6 | 984.6 (TRAVIS_JOB=test_snakemake) | 43 |
23.61 |
Travis Job 984.6 |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line | Branch Hits | Branch Misses |
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