27
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Ran 21 May 2015 12:25AM UTC

Jobs 2

Files 0

Run time 1s

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Build # 27

Build Type

push

travis-ci

Committed by

tomkinsc

Commit Message

speed improvements to file conversion, some refactoring/fixes

regexes and operator.itemgetter() are now used to parse and access the
genotypes for the selected samples. from profiling this has been found
to be faster than numpy index vectors, and the required casting, also
faster than list comprehensions. lines are now written out in blocks,
to take advantage of HDD dwell and SSD paging that emulates HDD
behavior.

Run Details

5 of 5 relevant lines covered (100.0%)

1.0 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	27.1	21 May 2015 12:25AM UTC	0	100.0	Travis Job 27.1
2	27.2	21 May 2015 12:28AM UTC	0		Travis Job 27.2

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