Ran
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Jobs
1
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Files
43
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Run time
3min
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323 of 2719 branches covered (11.88%)
1482 of 6272 relevant lines covered (23.63%)
0.24 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
0.0 |
-100.0% | util/feature_table_types.py |
1 |
93.88 |
-2.04% | tools/krona.py |
10 |
74.07 |
-6.17% | util/cmd.py |
14 |
0.0 |
-31.82% | tools/megan.py |
17 |
0.0 |
-54.84% | tools/fastqc.py |
17 |
53.7 |
-7.87% | tools/kraken.py |
20 |
0.0 |
-28.17% | tools/tbl2asn.py |
29 |
0.0 |
-78.38% | tools/bbmap.py |
30 |
0.0 |
-81.08% | tools/muscle.py |
30 |
0.0 |
-100.0% | tools/trimmomatic.py |
30 |
0.0 |
-85.71% | tools/cdhit.py |
35 |
0.0 |
-85.37% | tools/mvicuna.py |
37 |
0.0 |
-82.22% | tools/diamond.py |
38 |
52.55 |
-3.32% | tools/__init__.py |
49 |
0.0 |
-89.09% | tools/prinseq.py |
49 |
0.0 |
-92.45% | tools/trinity.py |
52 |
0.0 |
-86.67% | tools/vphaser2.py |
53 |
0.0 |
-84.13% | tools/gatk.py |
53 |
0.0 |
-94.64% | tools/gap2seq.py |
57 |
0.0 |
-89.06% | tools/blast.py |
59 |
0.0 |
-83.1% | tools/bmtagger.py |
60 |
0.0 |
-85.71% | tools/last.py |
67 |
0.0 |
-90.54% | tools/spades.py |
69 |
0.0 |
-60.53% | util/stats.py |
76 |
0.0 |
-75.25% | util/genbank.py |
81 |
0.0 |
-92.05% | tools/mafft.py |
101 |
28.07 |
-59.06% | tools/samtools.py |
102 |
0.0 |
-43.78% | util/vcf.py |
107 |
0.0 |
-81.06% | tools/novoalign.py |
110 |
38.56 |
-29.05% | tools/picard.py |
116 |
0.0 |
-69.05% | tools/bwa.py |
128 |
32.07 |
-37.32% | util/misc.py |
130 |
0.0 |
-84.97% | tools/snpeff.py |
133 |
0.0 |
-94.33% | tools/kmc.py |
144 |
0.0 |
-87.27% | util/feature_table.py |
197 |
0.0 |
-80.41% | util/illumina_indices.py |
222 |
43.37 |
-27.27% | metagenomics.py |
301 |
0.0 |
-76.59% | tools/mummer.py |
347 |
29.41 |
-42.04% | util/file.py |
ID | Job ID | Ran | Files | Coverage | |
---|---|---|---|---|---|
6 | 896.6 (TRAVIS_JOB=test_snakemake) | 43 |
23.63 |
Travis Job 896.6 |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line | Branch Hits | Branch Misses |
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