98: 63%

Ran 01 May 2015 09:29AM UTC

Jobs 1

Files 104

Run time 16s

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Build # 238

Build Type

push

travis-ci

Committed by

muffato

Commit Message

Merge branch 'gene_api'

* gene_api:
  Removed some deprecated methods
  The genomic_align_group table has been removed in 2011
  Removed "ORIG" methods that are not needed since end of 2011
  Finally removed fetch_all_by_MethodLinkSpeciesSet_Dnafrag()
  Merged fetch_by_gene_tree_root_id() into fetch_by_GeneTree() [in CAFEGeneFamilyAdaptor]
  GeneAlignAdaptor needs nothing from BaseRelationAdaptor
  The table is "method_link", not "method"
  fetch_by_stable_id() is only defined for families
  Don't use fetch_default_AlignedMember_for_Member(), it is not meant for end-user usage
  Less confusion between the legacy member API and the new gene/seq_member
  dataflow_output_id() accepts hashes
  new methods that better interconnect with the core API
  typo: we don't use prototypes

Run Details

7732 of 13631 relevant lines covered (56.72%)

725.71 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
2	238.2 (COVERALLS=true)	01 May 2015 09:29AM UTC	0	56.72	Travis Job 238.2

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