arviz-devs / arviz / 3064
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ahartikainen 
LOO-PIT (#696)

* rebase

* Update loo-pit to xarray stats changes

* Add docstring and new parameters

* Take into account xarray broadcasting

* Add module docstring

* lint fixes

* Take into account extreme case no y_hat <= y

* Extend make_ufunc to multiple array inputs

* Fix multiple arys input in wrap_xarray_ufunc

* Use extended wrap_warray_ufunc in loo_pit

* Start with test function wrapping

out array handling missing, does not work yet

* pointwise False working already

Missing pointwise True, and much better error handling

* implement apply_test_func for pointwise

Still not sure about broadcasting. Something feels off.

* Simplify make_ufunc indexing, let try except in test_fun handle errors

* thicken main line

* Add ecdf and theoretical envelope

* Modify call signature of loo_pit

* Use ECDF difference and add ecdf_fill option

* Continue with tests

Improve pymc posterior predictive handling (#702)

* Improve pymc posterior predictive handling

* Easier way to get ndraws

* increase testing

* black

* Use pymc keep_size argument instead of reshaping

Make error message more informative. (#707)

Update arviz/data/base.py

Co-Authored-By: Colin <ColCarroll@users.noreply.github.com>

Start tests

Update schools datasets (#715)

ddof=1 for std (#716)

Add significant figures option to plot_posterior (#705)

Update CmdStanPy functionality (#717)

* posteriorsample to runset

* small fix

Centralize number formatting. (#718)

* Centralize number formatting.

* Make a little nicer

* Run lint, remove fstrings

* Extend tests

* Testing and documentation

* Set "eager" loading for tests and docs

* python 3.5 syntax error?

* Use exclude argument before broadcasting

* Finish apply_test_functions docstring

added group argument to plot_posterior
made public and added to api make_ufunc and wrap_xarray_ufunc

* Add examples

* small code s... (continued)

7005 of 7433 relevant lines covered (94.24%)

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Jobs
ID Job ID Ran Files Coverage
1 3064.1 (PYTHON_VERSION=3.6 PYSTAN_VERSION=latest PYRO_VERSION=latest EMCEE_VERSION=2 NAME="UNIT") 58
94.11
 Travis Job 3064.1
2 3064.2 (PYTHON_VERSION=3.6 PYSTAN_VERSION=preview PYRO_VERSION=0.2.1 PYTORCH_VERSION=0.4.1 EMCEE_VERSION=3 NAME="UNIT") 58
93.57
 Travis Job 3064.2
3 3064.3 (PYTHON_VERSION=3.5 PYSTAN_VERSION=latest PYRO_VERSION=latest EMCEE_VERSION=2 NAME="UNIT") 58
94.11
 Travis Job 3064.3
4 3064.4 (PYTHON_VERSION=3.7 PYSTAN_VERSION=latest PYRO_VERSION=latest EMCEE_VERSION=2 NAME="UNIT") 58
94.11
 Travis Job 3064.4
5 3064.5 (PYTHON_VERSION=3.6 PYSTAN_VERSION=latest PYRO_VERSION=latest EMCEE_VERSION=2 NAME="LINT") 58
24.1
 Travis Job 3064.5
Source Files on build 3064