googlegenomics / gcp-variant-transforms / 1705
89%
master: 89%

LAST BUILD BRANCH: pysam
DEFAULT BRANCH: master
Ran
Jobs 1
Files 106
Run time 8s
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1705

Pull #484

travis-ci

web-flow 
Add support for parallel reading of bgzf.
The BGZF can end with .gz or .bgz, and must be in GCS.
The index file is required to be in the same path as bgzf ending with .tbi.
Only PyVCF Parser is supported.
Pull Request #484: Add support for parallel reading of bgzf.

218 of 218 new or added lines in 6 files covered. (100.0%)

7075 of 8216 relevant lines covered (86.11%)

0.86 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
97.67
 -0.53% gcp_variant_transforms/beam_io/vcf_header_io.py
8
65.71
 -4.39% gcp_variant_transforms/pipeline_common.py
10
88.96
 -5.64% gcp_variant_transforms/beam_io/vcfio.py
14
34.5
 -1.91% gcp_variant_transforms/vcf_to_bq.py
63
53.7
 -8.84% gcp_variant_transforms/beam_io/vcf_parser.py
71
21.98
 gcp_variant_transforms/beam_io/bgzf_io.py
Jobs
ID Job ID Ran Files Coverage
1 1705.1 106
86.11
 Travis Job 1705.1
Source Files on build 1705