98: 63%

Ran 19 May 2019 02:31PM UTC

Jobs 1

Files 162

Run time 8s

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Build # 4695

Build Type

cron

travis-ci

Committed by

muffato

Commit Message

Merge remote-tracking branch 'ensembl-github/release/97'

* ensembl-github/release/97: (75 commits)
  We try to use "vertebrates", not "ensembl"
  bugfix: when gerpelem cannot compute elements, we can still store the scores
  Updated pipeline diagrams for release 97
  This fix an issue that we encounter in the Gene Tree Highlighting pipeline when running on collections. The failure is because there are two versions of the same gene annotation (i.e. same stable IDs), one single species and one in a collection db, so the pipeline tries to run the same SQL for both species. The latter is not included in gene trees anyway. Insert ignore resolve the issue for us
  Check smaller tables first
  Use only basename for ticket summary
  New script to check all mlsses present in FTP
  Completed e97 vertebrates registry
  Removed debugging statements
  Added an option to filter by member source-name (requested by Web)
  Updates/bugfixes for JIRA tickets
  Script to create JIRA tickets from HC output
  Switch to SELECT for row counts
  Updates to REST testing script
  Updated whitespace characters in test db for GOC
  Updated GOC test db for schema change
  Bugfix for merge check table sizes
  Fixed homology stats query plan
  Improvements to GOC reuse
  Make copy_data.pl more robust to timeouts
  ...

Run Details

12592 of 19978 relevant lines covered (63.03%)

729.12 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	4695.1 (COVERALLS=true)	19 May 2019 02:31PM UTC	0	63.03	Travis Job 4695.1

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Ensembl / ensembl-compara / 4695
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