bigdatagenomics / adam / 4281

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Ran
Jobs 1
Files 143
Run time 6s
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Michael L Heuer 
Update Spark version to 2.4.3, add move to Scala 2.12 script.

166 of 166 new or added lines in 20 files covered. (100.0%)

6741 of 8546 relevant lines covered (78.88%)

0.79 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
5.71
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/ADAM2Fastq.scala
1
8.7
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/CountReadKmers.scala
1
89.47
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Fasta2ADAM.scala
1
61.82
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
76.52
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentDataset.scala
1
84.72
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentDataset.scala
1
92.0
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantDataset.scala
2
84.0
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/ADAM2Fasta.scala
2
63.64
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
3
85.11
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
3
87.18
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
3
51.91
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicDataset.scala
3
79.11
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordDataset.scala
18
60.79
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
89.47
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Fasta2ADAM.scala
2
84.0
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/ADAM2Fasta.scala
2
87.18
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
2
91.84
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
4
85.11
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
7
63.64
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
9
84.72
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentDataset.scala
9
5.71
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/ADAM2Fastq.scala
13
8.7
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/CountReadKmers.scala
21
76.52
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentDataset.scala
39
60.79
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
46
79.11
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordDataset.scala
Jobs
ID Job ID Ran Files Coverage
1 4281.1 143
78.88
Source Files on build 4281