googlegenomics / gcp-variant-transforms / 1695

89%

master: 89%

Pull #480

travis-ci

Create infrastructure to adding automatic flag selection and manipulation:
  - Add "Experiment" feature to flags to allow enabling/disabling certain workflows.
  - Add infrastructure to read, meassure and manipulate VCF files to extract 5 main signals:
   a) Line Count: extracted by figuring out the weight of a single record line and dividing total weight by former.
   b) Sample Count: extracted by finding the last header line per file, and deriving those sample names.
   c) Record Count: extracted by counting the number of lines per sample across all files.
   d) Size of files: extracted from filesystem metadata information.
   e) Count of files: extracted from filesystem metadata information.

All estimations currently have relative standard error of 3%.

494 of 494 new or added lines in 9 files covered. (100.0%)

7489 of 8496 relevant lines covered (88.15%)

0.88 hits per line