Clinical-Genomics / mutacc / 102
90%
master: 0%

LAST BUILD BRANCH: fix_picard_version
DEFAULT BRANCH: master
Ran
Jobs 1
Files 39
Run time 4s
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102

Pull #43

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Give binaries in config. Calculate 'padding' dynamically

The binaries to picard and seqkit are now given in the config file.
The padding is calculated dynamically based on the read lengths
Added CHANGELOG
Pull Request #43: Give binaries in config. Calculate 'padding' dynamically

61 of 61 new or added lines in 10 files covered. (100.0%)

863 of 957 relevant lines covered (90.18%)

0.9 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
87.27
 -0.48% mutacc/builds/build_dataset.py
1
90.38
 -0.92% mutacc/cli/root.py
1
98.11
 0.0% mutacc/mutaccDB/query.py
1
96.67
 0.0% mutacc/utils/vcf_writer.py
2
47.37
 -1.28% mutacc/cli/synthesize.py
2
96.46
 -1.41% mutacc/utils/bam_handler.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
47.37
 -1.28% mutacc/cli/synthesize.py
Jobs
ID Job ID Ran Files Coverage
1 102.1 39
90.18
 Travis Job 102.1
Source Files on build 102