10756
67%

Ran 09 Apr 2019 06:27PM UTC

Jobs 3

Files 2253

Run time 14min

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Build # 10756

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

New API to generate QC reports (#2216)

* sct_qc.py: New API to generate QC (WIP)

* sct_qc: Clarified usage

* reports/qc: Clarified comments

* sct_qc.py: Added examples in usage

* sct_straighten_spinalcord: Move generate_qc to reports/qc

* sct_straighten_spinalcord: Decided to remove qc report

Not relevant, this function is only intermediate process, if people want to debug, they can use verbose=2

* reports/qc: Enabled to input dataset and subject at module level

* sct_propseg: Introduced -qc-dataset and -qc-subject flags

* sct_deepseg_sc: Introduced -qc-dataset and -qc-subject flags

* sct_deepseg_gm: Introduced -qc-dataset and -qc-subject flags

* sct_register_multimodal: Introduced -qc-dataset and -qc-subject flags

* sct_register_to_template: Introduced -qc-dataset and -qc-subject flags

* sct_warp_template: Introduced -qc-dataset and -qc-subject flags

* sct_label_vertebrae: Introduced -qc-dataset and -qc-subject flags

* reports/qc: Made exception more explicit

* Clarified usage for -qc-dataset and -qc-subject

Run Details

119381 of 445567 relevant lines covered (26.79%)

0.31 hits per line

Jobs

ID	Job ID	Ran	Coverage
1	10756.1	09 Apr 2019 06:29PM UTC	26.76	Travis Job 10756.1
2	10756.2 (SCT_MINICONDA=2)	09 Apr 2019 06:27PM UTC	66.67	Travis Job 10756.2
3	10756.3 (SCT_MINICONDA=2)	09 Apr 2019 06:41PM UTC	67.97	Travis Job 10756.3

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