googlegenomics / gcp-variant-transforms / 1642
89%
master: 89%

LAST BUILD BRANCH: pysam
DEFAULT BRANCH: master
Ran
Jobs 1
Files 105
Run time 9s
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
1642

Pull #444

travis-ci

web-flow 
Apply the requested changes:
	- Removed merge test duplicate for _from_file option.
	- Modified combine and gnomad tests.
	- Updated the gs storage for said tests.
	- Remove legacy debugging code.
Pull Request #444: Implement file-of-patterns functionality

166 of 166 new or added lines in 8 files covered. (100.0%)

7153 of 8034 relevant lines covered (89.03%)

0.89 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
78.61
 5.46% gcp_variant_transforms/options/variant_transform_options.py
2
27.85
 0.0% gcp_variant_transforms/testing/integration/run_preprocessor_tests.py
2
26.49
 0.0% gcp_variant_transforms/testing/integration/run_vcf_to_bq_tests.py
5
69.41
 1.36% gcp_variant_transforms/pipeline_common.py
6
0.0
 0.0% gcp_variant_transforms/vcf_to_bq_preprocess.py
11
35.68
 -0.39% gcp_variant_transforms/vcf_to_bq.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
0.0
 0.0% gcp_variant_transforms/vcf_to_bq_preprocess.py
1
26.49
 0.0% gcp_variant_transforms/testing/integration/run_vcf_to_bq_tests.py
1
27.85
 0.0% gcp_variant_transforms/testing/integration/run_preprocessor_tests.py
2
69.41
 1.36% gcp_variant_transforms/pipeline_common.py
6
35.68
 -0.39% gcp_variant_transforms/vcf_to_bq.py
Jobs
ID Job ID Ran Files Coverage
1 1642.1 105
89.03
 Travis Job 1642.1
Source Files on build 1642