googlegenomics / gcp-variant-transforms / 1640
89%
master: 89%

LAST BUILD BRANCH: pysam
DEFAULT BRANCH: master
Ran
Jobs 1
Files 105
Run time 7s
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1640

Pull #444

travis-ci

web-flow 
Apply the requested changes:
	- Removed merge test duplicate for _from_file option.
	- Modified combine and gnomad tests.
	- Updated the gs storage for said tests.
	- Set PipeLine mode to Large if file input is provided.
Pull Request #444: Implement file-of-patterns functionality

153 of 153 new or added lines in 8 files covered. (100.0%)

7141 of 8024 relevant lines covered (89.0%)

0.89 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
78.61
 5.46% gcp_variant_transforms/options/variant_transform_options.py
2
27.85
 0.0% gcp_variant_transforms/testing/integration/run_preprocessor_tests.py
2
26.49
 0.0% gcp_variant_transforms/testing/integration/run_vcf_to_bq_tests.py
4
69.41
 1.36% gcp_variant_transforms/pipeline_common.py
6
0.0
 0.0% gcp_variant_transforms/vcf_to_bq_preprocess.py
10
35.29
 -0.77% gcp_variant_transforms/vcf_to_bq.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
0.0
 0.0% gcp_variant_transforms/vcf_to_bq_preprocess.py
1
26.49
 0.0% gcp_variant_transforms/testing/integration/run_vcf_to_bq_tests.py
1
27.85
 0.0% gcp_variant_transforms/testing/integration/run_preprocessor_tests.py
2
69.41
 1.36% gcp_variant_transforms/pipeline_common.py
21
35.29
 -0.77% gcp_variant_transforms/vcf_to_bq.py
Jobs
ID Job ID Ran Files Coverage
1 1640.1 105
89.0
 Travis Job 1640.1
Source Files on build 1640