5712
45%
master: 45%

Ran 01 Feb 2019 03:22AM UTC

Jobs 4

Files 98

Run time 11min

Badge

Embed ▾

pending completion

Build # 5712

Build Type

push

travis-ci

Committed by

tomka

Commit Message

Neuron similarity: add support for selective similarity matrix creation

The "Configuration" tab in the Neuron Similarity Widget is used to
create new similarity matrices that form the basis for NBLAST
comparisons. So far only a single set of similar skeletons and a single
set for a random skeleton sample have could be specified. It is now
possible to be more selective in terms of which skeletons are seen as
representative of similar pairs.

The UI allows to select between five similarity modes:

1. All skeletons, which is the same as the current behavior,
2. Sub-groups with same suffix, where all skeletons and transformed
skeletons are looked at as similar if they share a common suffix in
their name (taken from neuron name service). A suffix is everything
after the last underscore character in the name an no suffix is treated
as its own group.
3. Pairs with suffixes "_left" and "_right", in which skeletons with the
same name as except for the suffixes _left and _right form a group.
4. Skeletons with the same name and
5. a custom suffix regex.

The last option is in practice probably the most useful one.

Run Details

7783 of 17446 relevant lines covered (44.61%)

1.77 hits per line

Jobs

ID	Job ID	Ran	Coverage
1	5712.1	01 Feb 2019 03:23AM UTC	44.61	Travis Job 5712.1
2	5712.2	01 Feb 2019 03:22AM UTC	44.61	Travis Job 5712.2
3	5712.3	01 Feb 2019 03:22AM UTC	44.61	Travis Job 5712.3
4	5712.4	01 Feb 2019 03:33AM UTC	43.3	Travis Job 5712.4

Source Files on build 5712

Detailed source file information is not available for this build.

catmaid / CATMAID / 5712
45%
master: 45%

README BADGES
x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 5712

catmaid / CATMAID / 5712 45% master: 45%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 5712

catmaid / CATMAID / 5712
45%
master: 45%

README BADGES
x