bigdatagenomics / adam / 2943
79%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 1
Files 142
Run time 27s
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2943

Pull #2119

jenkins

GitHub 
Merge eec7b4b50 into af6f97af6
Pull Request #2119: Filter supplemental reads from scoring

1 of 1 new or added line in 1 file covered. (100.0%)

6738 of 8521 relevant lines covered (79.08%)

0.79 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
93.75
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
69.23
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
88.89
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
86.11
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
65.63
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
89.01
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
1
92.0
 -1.33% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantDataset.scala
1
96.63
 1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
81.82
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
94.19
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
2
68.52
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
79.34
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordDataset.scala
3
82.07
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
3
83.19
 -2.65% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
4
60.89
 -1.33% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
4
62.5
 -2.27% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
6
92.66
 0.47% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2943.1 142
79.08
Source Files on build 2943