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broadinstitute / catch / 277
95%
master: 94%

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Build:
LAST BUILD BRANCH: v1.5.1
DEFAULT BRANCH: master
Ran 10 Jan 2019 06:29AM UTC
Jobs 3
Files 63
Run time 10min
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haydenm
Add --small-seq-skip argument to design.py

Sometimes a sequence in an input dataset is too short; in particular,
if it is shorter than the probe length, candidate_probes is unable
to design candidate probes from it and raises an error. One way
to fix this is with the existing --small-seq-min argument, which
allows designing short probes against those sequences.

This argument allows the candidate_probes module to skip over
sequences that are shorter than a specified value (typically
the probe length minus 1). It is possible that such sequences
will not be covered in the design (i.e., if no other candidate
probe covers them).

1410 of 1593 branches covered (88.51%)

1 of 1 new or added line in 1 file covered. (100.0%)

4839 of 5088 relevant lines covered (95.11%)

2.85 hits per line

Jobs
ID Job ID Ran Files Coverage
1 277.1 10 Jan 2019 06:29AM UTC 0
95.11
Travis Job 277.1
2 277.2 10 Jan 2019 06:39AM UTC 0
95.11
Travis Job 277.2
3 277.3 10 Jan 2019 06:36AM UTC 0
95.11
Travis Job 277.3
Source Files on build 277
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