broadinstitute / hellbender / 627
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Jobs 1
Files 204
Run time 1min
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akiezun 
Merge pull request #257 from broadinstitute/ak_clone

removing clone - pushing it to 2 utils methods because htsjdk classes still use clone and don't have copy constructors

31 of 31 new or added lines in 22 files covered. (100.0%)

10257 of 13758 relevant lines covered (74.55%)

0.75 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
100.0
 src/main/java/org/broadinstitute/hellbender/tools/LeftAlignIndels.java
1
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/sam/AddOrReplaceReadGroups.java
1
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/sam/ReorderSam.java
1
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/sam/RevertOriginalBaseQualitiesAndAddMateCigar.java
1
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/sam/markduplicates/EstimateLibraryComplexity.java
1
100.0
 src/main/java/org/broadinstitute/hellbender/tools/walkers/rnaseq/SplitNCigarReads.java
1
100.0
 src/main/java/org/broadinstitute/hellbender/utils/clipping/ClippingOp.java
1
100.0
 src/main/java/org/broadinstitute/hellbender/utils/sam/mergealignment/AbstractAlignmentMerger.java

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 src/main/java/org/broadinstitute/hellbender/utils/sam/markduplicates/ReadEndsForMarkDuplicatesCodec.java
Jobs
ID Job ID Ran Files Coverage
1 627.1 (TERM=dumb) 0
74.55
 Travis Job 627.1
Source Files on build 627
Detailed source file information is not available for this build.