bigdatagenomics / adam / 2848
79%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 1
Files 142
Run time 13s
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2848

Pull #2075

jenkins

GitHub 
Merge bd9da4ae5 into f3ec46300
Pull Request #2075: [ADAM-2059] Properly pass back primitive typed arrays to HTSJDK.

8 of 8 new or added lines in 1 file covered. (100.0%)

6647 of 8392 relevant lines covered (79.21%)

0.79 hits per line

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 13.88% adam-core/src/main/scala/org/bdgenomics/adam/util/AttributeUtils.scala

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 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
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84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
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 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
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 1.49% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
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 -3.13% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/smithwaterman/SmithWaterman.scala
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 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
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 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
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 0.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
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 0.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
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 1.89% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
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 -3.7% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
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 -0.5% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
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 -0.9% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
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 -3.49% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
Jobs
ID Job ID Ran Files Coverage
1 2848.1 142
79.21
Source Files on build 2848