bigdatagenomics / adam / 2842
79%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 2
Files 142
Run time 2min
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2842

Pull #2072

jenkins

GitHub 
Merge 78de437e6 into 43d0595dc
Pull Request #2072: Update dependency versions, including htsjdk to 2.16.1 and guava to 27.0-jre

1 of 1 new or added line in 1 file covered. (100.0%)

6644 of 8395 relevant lines covered (79.14%)

1.58 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
93.15
 -1.37% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
1
65.63
 -3.13% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
90.0
 0.63% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
51.87
 -0.15% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
72.73
 -9.09% adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
1
94.62
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
69.23
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
92.86
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
62.61
 1.35% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
89.01
 -1.1% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
2
70.37
 3.7% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
84.13
 -0.25% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
2
59.46
 -5.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
2
97.01
 -2.99% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
2
94.38
 -2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
3
62.79
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
86.79
 -0.94% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
12
92.51
 -0.82% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2842.1 142
79.14
2 2842.2 142
79.14
Source Files on build 2842