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LoLab-VU / pysb / 812
77%
master: 79%

Build:
Build:
LAST BUILD BRANCH: gpu_ssa
DEFAULT BRANCH: master
Ran 19 Sep 2018 02:17AM UTC
Jobs 2
Files 102
Run time 34s
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JamesPino
For the GPU SSA implementation, I found a bug where it would save the state of the system too early. It is supposed to calculate a reaction and a time step. If the time step + time > the current time, the output matrix should be filled with the state up until step + time.

I fixed that here. In doing so, i realize the single step method, which calls each individual step on the gpu, isn't going to work. It would require passing back and forth between gpu and cpu multiple states. It is already a factor of 10 slower than the run_all method (runs entire simulation on gpu). Removing that code.

Also, cuda9 on ubuntu installs into /usr/bin, so I added it to the search nvcc path.

6782 of 9456 relevant lines covered (71.72%)

1.43 hits per line

Jobs
ID Job ID Ran Files Coverage
1 812.1 19 Sep 2018 02:17AM UTC 0
71.72
Travis Job 812.1
2 812.2 19 Sep 2018 02:18AM UTC 0
71.51
Travis Job 812.2
Source Files on build 812
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