905
76%

Ran 15 Sep 2018 04:04PM UTC

Jobs 6

Files 409

Run time 6min

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Build # 905

Build Type

push

travis-ci

Committed by

carandraug

Commit Message

t/LocalDB/Index/Blast.t: create test tempfiles within a tempdir (issue #281)

There's other tests that create files with the same name on the current
working directory with the same name.  If running the test suite with
jobs in parallel this causes failing tests, because multiple tests will
be writing and reading to the same file at the same time.

So use File::Temp to avoid clashes.

Specific case here is that Bio::Index::Blast->new will not creat a new
file, it will use an existing one if it's there. In this case, it was
reading an Index file for anoter format which had a different version
number.

Take the chance to rewrite the test to avoid code duplication.

Run Details

30880 of 45422 relevant lines covered (67.98%)

1466.5 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
6	905.6 (COVERAGE=1 TEST_PARTITION=1)	15 Sep 2018 04:11PM UTC	268	54.66	Travis Job 905.6
7	905.7 (COVERAGE=1 TEST_PARTITION=2)	15 Sep 2018 04:04PM UTC	183	51.47	Travis Job 905.7
8	905.8 (COVERAGE=1 TEST_PARTITION=3)	15 Sep 2018 04:08PM UTC	183	59.37	Travis Job 905.8
9	905.9 (COVERAGE=1 TEST_PARTITION=4)	15 Sep 2018 04:08PM UTC	147	54.26	Travis Job 905.9
10	905.10 (COVERAGE=1 TEST_PARTITION=5)	15 Sep 2018 04:05PM UTC	175	51.15	Travis Job 905.10
11	905.11 (COVERAGE=1 TEST_PARTITION=6)	15 Sep 2018 04:11PM UTC	145	54.78	Travis Job 905.11

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