broadinstitute / hellbender / 299
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Jobs 1
Files 176
Run time 10s
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lbergelson 
Merge pull request #168 from broadinstitute/lb_rename_option

renaming Option to Argument
closes #142

287 of 287 new or added lines in 31 files covered. (100.0%)

8930 of 13999 relevant lines covered (63.79%)

0.64 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
100.0
 src/main/java/org/broadinstitute/hellbender/cmdline/StandardArgumentDefinitions.java
1
100.0
 src/main/java/org/broadinstitute/hellbender/tools/examples/PrintReadsWithReference.java
2
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/DownsampleSam.java
2
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/FilterReads.java
2
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/FixMateInformation.java
2
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/ReorderSam.java
3
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/AddOrReplaceReadGroups.java
3
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/RevertOriginalBaseQualitiesAndAddMateCigar.java
4
100.0
 src/main/java/org/broadinstitute/hellbender/tools/picard/markduplicates/EstimateLibraryComplexity.java
6
100.0
 src/main/java/org/broadinstitute/hellbender/tools/SplitNCigarReads.java
6
100.0
 src/main/java/org/broadinstitute/hellbender/tools/walkers/bqsr/AnalyzeCovariates.java
12
100.0
 src/main/java/org/broadinstitute/hellbender/cmdline/CommandLineParser.java

Uncovered Existing Lines

Lines Coverage ∆ File
46
100.0
 src/main/java/org/broadinstitute/hellbender/cmdline/CommandLineParser.java
Jobs
ID Job ID Ran Files Coverage
1 299.1 (TERM=dumb) 0
63.79
 Travis Job 299.1
Source Files on build 299
Detailed source file information is not available for this build.