Ran
|
Jobs
2
|
Files
42
|
Run time
22min
|
Badge
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README BADGES
|
travis-ci
214 of 214 new or added lines in 6 files covered. (100.0%)
2070 of 6553 relevant lines covered (31.59%)
1.04 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
88.3 |
0.0% | tools/samtools.py |
6 |
71.45 |
0.29% | util/file.py |
10 |
80.25 |
1.34% | util/cmd.py |
13 |
66.87 |
1.82% | util/misc.py |
16 |
83.88 |
0.44% | read_utils.py |
141 |
95.74 |
tools/kmc.py |
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
100.0 |
0.0% | util/feature_table_types.py |
1 |
95.83 |
0.0% | tools/krona.py |
2 |
80.25 |
1.34% | util/cmd.py |
14 |
31.82 |
0.0% | tools/megan.py |
14 |
91.43 |
0.0% | tools/cdhit.py |
17 |
79.33 |
0.0% | tools/kraken.py |
20 |
64.52 |
0.0% | tools/fastqc.py |
21 |
85.37 |
0.0% | tools/mvicuna.py |
24 |
27.27 |
0.0% | util/illumina_indices.py |
29 |
83.87 |
0.0% | tools/gatk.py |
30 |
81.08 |
0.0% | tools/muscle.py |
30 |
42.25 |
0.0% | tools/tbl2asn.py |
30 |
100.0 |
0.0% | tools/trimmomatic.py |
36 |
89.09 |
0.0% | tools/prinseq.py |
39 |
51.94 |
0.0% | tools/__init__.py |
43 |
91.49 |
0.0% | tools/trinity.py |
52 |
86.67 |
0.0% | tools/vphaser2.py |
52 |
89.66 |
0.0% | tools/spades.py |
52 |
94.55 |
0.0% | tools/gap2seq.py |
57 |
89.06 |
0.0% | tools/blast.py |
59 |
83.1 |
0.0% | tools/bmtagger.py |
59 |
69.05 |
0.0% | tools/bwa.py |
60 |
85.71 |
0.0% | tools/last.py |
69 |
60.53 |
0.0% | util/stats.py |
76 |
75.25 |
0.0% | util/genbank.py |
78 |
88.3 |
0.0% | tools/samtools.py |
81 |
92.05 |
0.0% | tools/mafft.py |
83 |
81.06 |
0.0% | tools/novoalign.py |
87 |
68.87 |
0.0% | tools/picard.py |
90 |
66.87 |
1.82% | util/misc.py |
98 |
75.39 |
0.0% | metagenomics.py |
102 |
43.78 |
0.0% | util/vcf.py |
125 |
86.21 |
0.0% | tools/snpeff.py |
143 |
87.73 |
0.0% | util/feature_table.py |
225 |
71.45 |
0.29% | util/file.py |
241 |
83.88 |
0.44% | read_utils.py |
290 |
76.12 |
0.0% | tools/mummer.py |
ID | Job ID | Ran | Files | Coverage | |
---|---|---|---|---|---|
5 | 6609.5 (TRAVIS_JOB=test_py36) | 50 |
74.56 |
Travis Job 6609.5 | |
6 | 6609.6 (TRAVIS_JOB=test_snakemake) | 42 |
31.59 |
Travis Job 6609.6 |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|