bigdatagenomics / adam / 2796
79%
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LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 2
Files 142
Run time 15s
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2796

Pull #2028

jenkins

GitHub 
Merge e66f442a4 into 8f4b4a452
Pull Request #2028: [ADAM-2027] Add RDD and Dataset constructors to CoverageRDD.

4 of 4 new or added lines in 1 file covered. (100.0%)

6590 of 8349 relevant lines covered (78.93%)

1.58 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
62.61
 0.9% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
98.11
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
94.19
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
62.16
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
79.34
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
96.63
 3.37% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
81.82
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
1
93.15
 -1.37% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
1
94.62
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
93.33
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
84.32
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
96.92
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
84.78
 -2.17% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
1
92.86
 -3.57% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
59.26
 -2.47% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
3
62.34
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
90.74
 -2.78% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
3
87.74
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
83.49
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
4
68.52
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
8
92.39
 -0.12% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2796.1 142
78.93
2 2796.2 142
78.93
Source Files on build 2796