Ran
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Jobs
2
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Files
41
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Run time
11min
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README BADGES
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travis-ci
2047 of 6258 relevant lines covered (32.71%)
1.03 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
100.0 |
0.0% | util/feature_table_types.py |
1 |
95.83 |
0.0% | tools/krona.py |
2 |
78.91 |
0.0% | util/cmd.py |
14 |
31.82 |
0.0% | tools/megan.py |
14 |
91.43 |
0.0% | tools/cdhit.py |
17 |
79.33 |
0.0% | tools/kraken.py |
20 |
64.52 |
0.0% | tools/fastqc.py |
21 |
85.37 |
0.0% | tools/mvicuna.py |
24 |
27.27 |
0.0% | util/illumina_indices.py |
25 |
25.25 |
0.0% | util/genbank.py |
28 |
84.75 |
0.0% | tools/gatk.py |
30 |
81.08 |
0.0% | tools/muscle.py |
30 |
42.25 |
0.0% | tools/tbl2asn.py |
30 |
100.0 |
0.0% | tools/trimmomatic.py |
36 |
89.09 |
0.0% | tools/prinseq.py |
39 |
51.94 |
0.0% | tools/__init__.py |
40 |
27.78 |
0.0% | tools/snpeff.py |
43 |
91.49 |
0.0% | tools/trinity.py |
52 |
86.67 |
0.0% | tools/vphaser2.py |
52 |
89.66 |
0.0% | tools/spades.py |
52 |
94.55 |
0.0% | tools/gap2seq.py |
57 |
89.06 |
0.0% | tools/blast.py |
59 |
83.1 |
0.0% | tools/bmtagger.py |
59 |
69.05 |
0.0% | tools/bwa.py |
60 |
85.71 |
0.0% | tools/last.py |
69 |
60.53 |
0.0% | util/stats.py |
77 |
87.5 |
0.0% | tools/mafft.py |
79 |
88.3 |
0.0% | tools/samtools.py |
83 |
81.06 |
0.0% | tools/novoalign.py |
87 |
68.87 |
0.0% | tools/picard.py |
97 |
67.31 |
0.0% | util/misc.py |
98 |
75.39 |
0.0% | metagenomics.py |
102 |
43.78 |
0.0% | util/vcf.py |
143 |
87.73 |
0.0% | util/feature_table.py |
165 |
70.67 |
0.0% | util/file.py |
241 |
83.43 |
0.0% | read_utils.py |
290 |
76.12 |
0.0% | tools/mummer.py |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
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