bigdatagenomics / adam / 2789
79%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 142
Run time 1min
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2789

Pull #2016

jenkins

GitHub 
Merge d95fb0c10 into 8e8007eb9
Pull Request #2016: Add direct conversion from DatasetBoundFragmentRDD to DatasetBoundAli…

3 of 3 new or added lines in 1 file covered. (100.0%)

6587 of 8348 relevant lines covered (78.91%)

3.16 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
62.16
 0.45% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab5InFormatter.scala
1
98.11
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
93.02
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
51.87
 -0.15% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
62.16
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
96.88
 -3.13% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/smithwaterman/SmithWaterman.scala
1
92.59
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
94.38
 1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
72.73
 -9.09% adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
1
93.15
 -1.37% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
1
94.62
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
93.33
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
62.5
 -3.13% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
96.92
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
84.78
 -2.17% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
1
85.32
 0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
92.86
 -3.57% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
79.22
 -0.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
3
68.52
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
64.94
 2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
92.86
 0.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
3
84.06
 -0.26% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
5
86.79
 -2.83% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
Jobs
ID Job ID Ran Files Coverage
1 2789.1 142
78.91
2 2789.2 142
78.91
3 2789.3 142
78.91
4 2789.4 142
78.91
Source Files on build 2789