bigdatagenomics / adam / 3687

DEFAULT BRANCH: master
Ran
Jobs 2
Files 142
Run time 30s
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3687

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jenkins

Frank Austin Nothaft 
Add loadPairedFastqAsFragments method.

3 of 3 new or added lines in 2 files covered. (100.0%)

6583 of 8287 relevant lines covered (79.44%)

1.59 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
88.64
 -1.14% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
71.15
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
61.26
 0.45% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
1
60.49
 -1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
80.0
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
83.8
 -0.26% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
59.38
 -3.13% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
90.0
 -1.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
96.92
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
89.01
 -1.1% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
1
84.78
 -2.17% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
2
72.22
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
59.46
 -5.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
2
95.51
 1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
88.35
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
84.4
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
62.34
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
4
79.46
 -0.24% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
6
92.74
 0.25% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 3687.1 142
79.44
2 3687.2 142
79.44
Source Files on build 3687