bigdatagenomics / adam / 2775
79%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 142
Run time 20s
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2775

Pull #1983

jenkins

GitHub 
Merge d70847455 into f05aa9823
Pull Request #1983: [ADAM-1978] Add additional filter by convenience methods.

82 of 82 new or added lines in 4 files covered. (100.0%)

6559 of 8272 relevant lines covered (79.29%)

3.17 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
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 -3.49% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala

Uncovered Existing Lines

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1
69.23
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
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 1.35% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
51.95
 -0.15% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
62.16
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
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90.0
 -0.63% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
81.82
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
1
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 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
1
60.49
 -1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
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93.33
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
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 0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
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 -1.1% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
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84.78
 -2.17% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
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 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
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 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
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 -1.85% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
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 -2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
84.06
 0.23% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
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 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
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 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
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 -0.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
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92.17
 0.47% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2775.1 142
79.29
2 2775.2 142
79.29
3 2775.3 142
79.29
4 2775.4 142
79.29
Source Files on build 2775