Ran
|
Jobs
1
|
Files
40
|
Run time
8s
|
Badge
Embed ▾
README BADGES
|
push
travis-ci
2010 of 6146 relevant lines covered (32.7%)
0.33 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
93.75 |
-2.08% | tools/krona.py |
8 |
74.52 |
-5.1% | util/cmd.py |
13 |
0.0 |
-13.54% | util/genbank.py |
14 |
0.0 |
-31.82% | tools/megan.py |
14 |
51.43 |
-40.0% | tools/cdhit.py |
17 |
68.24 |
-11.49% | tools/kraken.py |
20 |
0.0 |
-64.52% | tools/fastqc.py |
21 |
34.15 |
-51.22% | tools/mvicuna.py |
24 |
0.0 |
-27.27% | util/illumina_indices.py |
28 |
37.29 |
-47.46% | tools/gatk.py |
29 |
0.0 |
-43.94% | tools/tbl2asn.py |
30 |
0.0 |
-81.08% | tools/muscle.py |
30 |
0.0 |
-100.0% | tools/trimmomatic.py |
36 |
23.64 |
-65.45% | tools/prinseq.py |
39 |
42.48 |
-9.47% | tools/__init__.py |
40 |
0.0 |
-27.78% | tools/snpeff.py |
43 |
0.0 |
-91.49% | tools/trinity.py |
51 |
34.64 |
-33.33% | tools/bwa.py |
52 |
0.0 |
-86.67% | tools/vphaser2.py |
52 |
0.0 |
-89.66% | tools/spades.py |
52 |
0.0 |
-94.55% | tools/gap2seq.py |
57 |
0.0 |
-89.06% | tools/blast.py |
59 |
0.0 |
-83.1% | tools/bmtagger.py |
59 |
0.0 |
-86.76% | tools/last.py |
69 |
0.0 |
-60.53% | util/stats.py |
76 |
42.94 |
-46.63% | tools/samtools.py |
77 |
0.0 |
-87.5% | tools/mafft.py |
83 |
18.18 |
-62.88% | tools/novoalign.py |
85 |
41.77 |
-26.9% | tools/picard.py |
93 |
0.0 |
-82.86% | tools/kmc.py |
98 |
35.42 |
-30.72% | util/misc.py |
98 |
63.68 |
-11.71% | metagenomics.py |
102 |
0.0 |
-43.78% | util/vcf.py |
179 |
33.47 |
-36.76% | util/file.py |
222 |
48.43 |
-33.18% | read_utils.py |
290 |
0.0 |
-76.12% | tools/mummer.py |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|