biocore / gneiss / 734

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Sparse utils (#253)

* DOC: Updating changelog

* Update CHANGELOG.md

* FIX: fix issues with pep8

* FIX: pep8 -> pycodestyle

* DOC: fixing toctree

* STY: flake8

* ENH: Adding in sparse representation for tree

* STY: pep8 flake8

* STY: removing except statement

* ENH: Adding in sparse match tips

* TST: Testing sparse utils

* ENH: adding in sparse matrix multiplication and minibatchin

* TST: correcting balance test

* ENH: Adding in matrix multiplication on sparse indices

* ENH: Finalizing matching algorithms to be able to handle biom tables

* STY: flake8 issues

* BLD: Adding biom dependency

* correcting misspelling

* STY: pep8

* STY: more typos

* TST: Fixing unittests for biom_match

* TST: relaxing tests for clustering

* pep8

* pep8

* Adding test for design_matrix

356 of 396 branches covered (89.9%)

49 of 49 new or added lines in 1 file covered. (100.0%)

1144 of 1183 relevant lines covered (96.7%)

0.97 hits per line