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broadinstitute / hellbender / 85
73%
master: 81%

Build:
Build:
LAST BUILD BRANCH: dr_disentangle_spark_and_dataflow
DEFAULT BRANCH: master
Ran 07 Jan 2015 08:09PM UTC
Jobs 1
Files 16
Run time 8s
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droazen
Refactor exceptions: add UserException, remove ReviewedHellbenderException, rename HellbenderException to GATKException

The important distinction is not between "reviewed" and "unreviewed" exceptions (all
use of exceptions should be reviewed in code review, after all), but between user mistakes
and internal sanity check failures.

To this end, I've ported UserException from the old GATK codebase (preserving only the
most generally useful subclasses -- we can add more later if needed), removed the silly
ReviewedHellbenderException, and renamed HellbenderException to GATKException, which is
what should be thrown for all errors that are not the user's fault.

75 of 75 new or added lines in 4 files covered. (100.0%)

919 of 1258 relevant lines covered (73.05%)

0.73 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
100.0
src/main/java/org/broadinstitute/hellbender/tools/CompareSAMs.java
19
100.0
src/main/java/org/broadinstitute/hellbender/cmdline/CommandLineParser.java
46
100.0
src/main/java/org/broadinstitute/hellbender/exceptions/UserException.java
Jobs
ID Job ID Ran Files Coverage
1 85.1 (TERM=dumb) 07 Jan 2015 08:09PM UTC 0
73.05
Travis Job 85.1
Source Files on build 85
Detailed source file information is not available for this build.
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