bigdatagenomics / adam / 3481

DEFAULT BRANCH: master
Ran
Jobs 1
Files 142
Run time 6s
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3481

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jenkins

Frank Austin Nothaft 
Support validation stringency in out formatters.

6 of 6 new or added lines in 1 file covered. (100.0%)

6474 of 8188 relevant lines covered (79.07%)

0.79 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
90.0
 -4.44% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VCFOutFormatter.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
94.62
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
94.27
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
93.33
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
93.02
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
51.95
 -0.15% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
91.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
73.08
 -0.96% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
89.38
 -0.63% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
61.73
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
2
69.23
 -3.85% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
67.53
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
62.5
 -6.25% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
3
74.07
 3.7% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
79.71
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
3
87.38
 -1.94% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
83.49
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
4
60.81
 -1.35% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
12
90.98
 -0.71% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 3481.1 142
79.07
Source Files on build 3481
Coverage ∆ File Lines Relevant Covered Missed Hits/Line