googlegenomics / gcp-variant-transforms / 508
89%

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Ran
Jobs 1
Files 52
Run time 2s
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Resolves value/schema mistmatches (#146)

* Resolves value/schema mistmatches

Use conflict resolver to resolves mismatches between field data and field schema.

Tested:
  unit test
  ran on 1000genomes datatset

187 of 187 new or added lines in 13 files covered. (100.0%)

3630 of 4007 relevant lines covered (90.59%)

0.91 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
93.65
 0.47% gcp_variant_transforms/libs/vcf_field_conflict_resolver_test.py
1
53.13
 -0.84% gcp_variant_transforms/options/variant_transform_options.py
2
96.23
 0.67% gcp_variant_transforms/libs/bigquery_schema_descriptor_test.py
2
98.78
 -1.22% gcp_variant_transforms/libs/bigquery_vcf_schema_test.py
3
97.35
 -2.65% gcp_variant_transforms/libs/bigquery_vcf_schema.py
3
69.7
 -3.38% gcp_variant_transforms/transforms/variant_to_bigquery.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
51.24
 0.0% gcp_variant_transforms/vcf_to_bq.py
1
69.7
 -3.38% gcp_variant_transforms/transforms/variant_to_bigquery.py
1
53.13
 -0.84% gcp_variant_transforms/options/variant_transform_options.py
3
93.65
 0.47% gcp_variant_transforms/libs/vcf_field_conflict_resolver_test.py
Jobs
ID Job ID Ran Files Coverage
1 508.1 52
90.59
 Travis Job 508.1
Source Files on build 508